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Cell and molecular biology : concepts and experiments / Gerald Karp.
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Title:Cell and molecular biology : concepts and experiments / Gerald Karp.
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Author/Creator:Karp, Gerald.
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Other Contributors/Collections:Patton, James G.
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Published/Created:Hoboken, NJ : John Wiley, ©2013.
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Holdings
Holdings Record Display
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Location:WOODWARD LIBRARY stacksWhere is this?
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Call Number: QU300 .K18c 2013
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Number of Items:1
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Status:Available
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Location:WOODWARD LIBRARY stacksWhere is this?
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Library of Congress Subjects:Cytology.
Molecular biology.
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Medical Subjects: Cells.
Molecular Biology.
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Edition:7th ed.
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Description:xvi, 783, [63] pages : illustrations (chiefly col) ; 29 cm
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Summary:This Seventh Edition connects experimental material to key concepts of Cell Biology. The text offers streamlined information that reinforces a connection of key concepts to experimentation. Though the use paired art, and new science illustrations, readers benefit from a visual representation of experimental connections. Animated clips are tied to key illustrations with practice questions to provide a variety of ways to experience a key concept. This new edition offers an appropriate balance of concepts and experimentation. Experimental detail is offered when it helps to reinforce the concept being explained.
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Notes:"Chapter 12 was revised in collaboration with James G. Patton."
Includes bibliographical references and index.
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ISBN:9781118206737
1118206738
9781118301791
111830179X
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Contents:Machine generated contents note: 1.1. Discovery of Cells
1.2. Basic Properties of Cells
Cells Are Highly Complex and Organized
Cells Possess a Generic Program and the Means to Use It
Cells Are Capable of Producing More of Themselves
Cells Acquire and Utilize Energy
Cells Carry Out a Variety of Chemical Reactions
Cells Engage in Mechanical Activities
Cells Are Able to Respond to Stimuli
Cells Are Capable of Self-Regulation
Cells Evolve
1.3. Two Fundamentally Different Classes of Cells
Characteristics That Distinguish Prokaryotic and Eukaryotic Cells
Types of Prokaryotic Cells
Types of Eukaryotic Cells: Cell Specialization
Sizes of Cells and Their Components
Synthetic Biology
Human Perspective: The Prospect of Cell Replacement Therapy
1.4. Viruses
Viroids
Experimental Pathways: The Origin of Eukaryotic Cells
2.1. Covalent Bonds
Polar and Nonpolar Molecules
Ionizaton
2.2. Noncovalent Bonds
Human Perspective: Free Radicals as a Cause of Aging
Ionic Bonds: Attractions between Charged Atoms
Hydrogen Bonds
Hydrophobic Interactions and van der Waals Forces
Life-Supporting Properties of Water
2.3. Acids, Bases, and Buffers
2.4. Nature of Biological Molecules
Functional Groups
Classification of Biological Molecules by Function
2.5. Four Types of Biological Molecules
Carbohydrates
Lipids
Proteins
Human Perspective: Protein Misfolding Can Have Deadly Consequences
Nucleic Acids
2.6. Formation of Complex Macromolecular Structures
Assembly of Tobacco Mosaic Virus Particles and Ribosomal Subunits
Experimental Pathways: Chaperones: Helping Proteins Reach Their Proper Folded State
3.1. Bioenergetics
Laws of Thermodynamics and the Concept of Entropy
Free Energy
3.2. Enzymes as Biological Catalysts
Properties of Enzymes
Overcoming the Activation Energy Barrier
Active Site
Mechanisms of Enzyme Catalysis
Enzyme Kinetics
Human Perspective: The Growing Problem of Antibiotic Resistance
3.3. Metabolism
Overview of Metabolism
Oxidation and Reduction: A Matter of Electrons
Capture and Utilization of Energy
Metabolic Regulation
4.1. Overview of Membrane Functions
4.2. Brief History of Studies on Plasma Membrane Structure
4.3. Chemical Composition of Membranes
Membrane Lipids
Asymmetry of Membrane Lipids
Membrane Carbohydrates
4.4. Structure and Functions of Membrane Proteins
Integral Membrane Proteins
Studying the Structure and Properties of Integral Membrane Proteins
Peripheral Membrane Proteins
Lipid-Anchored Membrane Proteins
4.5. Membrane Lipids and Membrane Fluidity
Importance of Membrane Fluidity
Maintaining Membrane Fluidity
Lipid Rafts
4.6. Dynamic Nature of the Plasma Membrane
Diffusion of Membrane Proteins after Cell Fusion
Restrictions on Protein and Lipid Mobility
Red Blood Cell: An Example of Plasma Membrane Structure
4.7. Movement of Substances Across Cell Membranes
Energetics of Solute Movement
Diffusion of Substances through Membranes
Facilitated Diffusion
Active Transport
Human Perspective: Defects in Ion Channels and Transporters as a Cause of Inherited Disease
4.8. Membrane Potentials and Nerve Impulses
Resting Potential
Action Potential
Propagation of Action Potentials as an Impulse
Neurotransmission: Jumping the Synaptic Cleft
Experimental Pathways: The Acetylcholine Receptor
5.1. Mitochondria! Structure and Function
Mitochondrial Membranes
Mitochondrial Matrix
5.2. Oxidative Metabolism in the Mitochondrion
Tricarboxylic Acid (TCA) Cycle
Importance of Reduced Coenzymes in the Formation of ATP
Human Perspective: The Role of Anaerobic and Aerobic Metabolism in Exercise
5.3. Role of Mitochondria in the Formation of ATP
Oxidation[-]Reduction Potentials
Electron Transport
Types of Electron Carriers
5.4. Translocation of Protons and the Establishment of a Proton-Motive Force
5.5. Machinery for ATP Formation
Structure of ATP Synthase
Basis of ATP Formation According to the Binding Change Mechanism
Other Roles the Proton-Motive Puree in Addition to ATP Synthesis
5.6. Peroxisomes
Human Perspective: Diseases that Result from Abnormal Mitochondrial or Peroxisomal Function
6.1. Chloroplast Structure and Function
6.2. Overview of Photosynthetic Metabolism
6.3. Absorption of Light
Photosynthetic Pigments
6.4. Photosynthetic Units and Reaction Centers
Oxygen Formation: Coordinating the Action of Two Different Photosynthetic Systems
Killing Weeds by Inhibiting Electron Transport
6.5. Photophosphorylation
Noncyclic Versus Cyclic Photophosphorylation
6.6. Carbon Dioxide Fixation and the Synthesis of Carbohydrate
Carbohydrate Synthesis in C3 Plants
Carbohydrate Synthesis in C4 Plants
Carbohydrate Synthesis in CAM Plants
7.1. Extracellular Space
Extracellular Matrix
7.2. Interactions of Cells with Extracellular Materials
Integrins
Focal Adhesions and Hemidesmosomes: Anchoring Cells to Their Substratum
7.3. Interactions of Cells with Other Cells
Selectins
Immunoglobulin Superfamily
Cadherins
Human Perspective: The Role of Cell Adhesion in Inflammation and Metastasis
Adherens Junctions and Desmosomes: Anchoring Cells to Other Cells
Role of Cell-Adhesion Receptors in Transmembrane Signaling
7.4. Tight Junctions: Sealing The Extracellular Space
7.5. Gap Junctions and Plasmodesmata: Mediating Intercellular Communication
Plasmodesmata
7.6. Cell Walls
8.1. Overview of the Endomembrane System
8.2. Few Approaches to the Study of Endomembranes
Insights Gained from Autoradiography
Insights Gained from the Use of the Green Fluorescent Protein
Insights Gained from the Biochemical Analysis of Subcellular Fractions
Insights Gained from the Use of Cell-Free Systems
Insights Gained from the Study of Mutant Phenotypes
8.3. Endoplasmic Reticulum
Smooth Endoplasmic Reticulum
Functions of the Rough Endoplasmic Reticulum
From the ER to the Golgi Complex: The First Step in Vesicular Transport
8.4. Golgi Complex
Glycosylation in the Golgi Complex
Movement of Materials through the Golgi Complex
8.5. Types of Vesicle Transport and Their Functions
COPII-Coated Vesicles: Transporting Cargo from the ER to the Golgi Complex
COPI-Coated Vesicles: Transporting Escaped Proteins Back to the ER
Beyond the Golgi Complex: Sorting Proteins at the TGN
Targeting Vesicles to a Particular Compartment
8.6. Lysosomes
Autophagy
Human Perspective: Disorders Resulting from Defects in Lysosomal Function
8.7. Plant Cell Vacuoles
8.8. Endocytic Pathway: Moving Membrane and Materials into the Cell Interior
Endocytosis
Phagocytosis
8.9. Posttranslational Uptake of Proteins by Peroxisomes, Mitochondria, and Chloroplasts
Uptake of Proteins into Peroxisomes
Uptake of Proteins into Mitochondria
Uptake of Proteins into Chloroplasts
Experimental Pathways: Receptor-Mediated Endocytosis
9.1. Overview of the Major Functions of the Cytoskeleton
9.2. Study of the Cytoskeleton
Use of Live-Cell Fluorescence Imaging
Use of In Vitro and In Vivo Single-Molecule Assays
Use of Fluorescence Imaging Techniques to Monitor the Dynamics of the Cytoskeleton
9.3. Microtubules
Structure and Composition
Microtubule-Associated Proteins
Microtubules as Structural Supports and Organizers
Microtubules as Agents of Intracellular Motility
Motor Proteins that Traverse the Microtubular Cytoskeleton
Microtubule-Organizing Centers (MTOCs)
Dynamic Properties of Microtubules
Cilia and Flagella: Structure and Function
Human Perspective: The Role of Cilia in Development and Disease
9.4. Intermediate Filaments
Intermediate Filament Assembly and Disassembly
Types and Functions of Intermediate Filaments
9.5. Microfilaments
Microfilament Assembly and Disassembly
Myosin: The Molecular Motor of Actin Filaments
9.6. Muscle Contractility
Sliding Filament Model of Muscle Contraction
9.7. Nonmuscle Motility
Actin-Binding Proteins
Examples of Nonmuscle Motility and Contractility
10.1. Concept of a Gene as a Unit of Inheritance
10.2. Chromosomes: The Physical Carriers of the Genes
Discovery of Chromosomes
Chromosomes as the Carriers of Genetic Information
Genetic Analysis in Drosophila
Crossing Over and Recombination
Mutagenesis and Giant Chromosomes
10.3. Chemical Nature of the Gene
Structure of DNA
Watson-Crick Proposal
DNA Supercoiling
10.4. Structure of the Genome
Complexity of the Genome
Human Perspective: Diseases that Result from Expansion of Trinucleotide Repeats
10.5. Stability of the Genome
Whole-Genome Duplication (Polyploidization)
Duplication and Modification of DNA Sequences
"Jumping Genes" and the Dynamic Nature of the Genome
10.6. Sequencing Genomes: The Footprints of Biological Evolution
Comparative Genomics: "If It's Conserved, It Must Be Important"
Genetic Basis of "Being Human"
Genetic Variation Within the Human Species Population
Human Perspective: Application of Genomic Analyses to Medicine
Experimental Pathways: The Chemical Nature of the Gene
11.1. Relationship between Genes, Proteins, and RNAs
Overview of the Flow of Information through the Cell
Contents note continued: 11.2. Overview of Transcription in Both Prokaryotic and Eukaryotic Cells
Transcription in Bacteria
Transcription and RNA Processing in Eukaryotic Cells
11.3. Synthesis and Processing of Eukaryotic Ribosomal and Transfer RNAs
Synthesizing the rRNA Precursor
Processing the rRNA Precursor
Synthesis and Processing of the 5S rRNA
Transfer RNAs
11.4. Synthesis and Processing of Eukaryotic Messenger RNAs
Machinery for mRNA Transcription
Split Genes: An Unexpected Finding
Processing of Eukaryotic Messenger RNAs
Evolutionary Implications of Split Genes and RNA Splicing
Creating New Ribozymes in the Laboratory
11.5. Small Regulatory RNAs and RNA Silencing Pathways
Human Perspective: Clinical Applications of RNA Interference
MicroRNAs: Small RNAs that Regulate Gene Expression
piRNAs: A Class of Small RNAs that Function in Germ Cells
Other Noncoding RNAs
11.6. Encoding Genetic Information
Properties of the Genetic Code
11.7. Decoding the Codons: The Role of Transfer RNAs
Structure of tRNAs
11.8. Translating Genetic Information
Initiation
Elongation
Termination
mRNA Surveillance and Quality Control
Polyribosomes
Experimental Pathways: The Role of RNA as a Catalyst
12.1. Control of Gene Expression in Bacteria
Organization of Bacterial Genomes
Bacterial Operon
Riboswitches
12.2. Control of Gene Expression in Eukaryotes: Structure and Function of the Cell Nucleus
Nuclear Envelope
Chromosomes and Chromatin
Human Perspective: Chromosomal Aberrations and Human Disorders
Epigenetics: There's More to Inheritance than DNA
Nucleus as an Organized Organelle
12.3. Overview of Gene Regulation in Eukaryotes
12.4. Transcriptional Control
Role of Transcription Factors in Regulating Gene Expression
Structure of Transcription Factors
DNA Sites Involved in Regulating Transcription
Transcriptional Activation: The Role of Enhancers, Promoters, and Coactivators
Transcriptional Repression
12.5. RNA Processing Control
12.6. Translational Control
Initiation of Translation
Cytoplasmic Localization of mRNAs
Control of mRNA Stability
Role of MicroRNAs in Translational Control
12.7. Posttranslational Control: Determining Protein Stability
13.1. DNA Replication
Semiconservative Replication
Replication in Bacterial Cells
Structure and Functions of DNA Polymerases
Replication in Eukaryotic Cells
13.2. DNA Repair
Nucleotide Excision Repair
Base Excision Repair
Mismatch Repair
Double-Strand Breakage Repair
13.3. Between Replication and Repair
Human Perspective: The Consequences of DNA Repair Deficiencies
14.1. Cell Cycle
Cell Cycles in Vivo
Control of the Cell Cycle
14.2. M Phase: Mitosis and Cytokinesis
Prophase
Prometaphase
Metaphase
Anaphase
Telophase
Motor Proteins Required for Mitotic Movements
Cytokinesis
14.3. Meiosis
Stages of Meiosis
Human Perspective: Meiotic Nondisjunction and Its Consequences
Genetic Recombination During Meiosis
Experimental Pathways: The Discovery and Characterization of MPF
15.1. Basic Elements of Cell Signaling Systems
15.2. Survey of Extracellular Messengers and Their Receptors
15.3. G Protein-Coupled Receptors and Their Second Messengers
Signal Transduction by G Protein-Coupled Receptors
Human Perspective: Disorders Associated with G Protein-Coupled Receptors
Second Messengers
Specificity of G Protein-Coupled Responses
Regulation of Blood Glucose Levels
Role of GPCRs in Sensory Perception
15.4. Protein-Tyrosine Phosphorylation as a Mechanism for Signal Transduction
Ras-MAP Kinase Pathway
Signaling by the Insulin Receptor
Human Perspective: Signaling Pathways and Human Longevity
Signaling Pathways in Plants
15.5. Role of Calcium as an Intracellular Messenger
Regulating Calcium Concentrations in Plant Cells
15.6. Convergence, Divergence, and Cross-Talk Among Different Signaling Pathways
Examples of Convergence, Divergence, and Cross-Talk Among Signaling Pathways
15.7. Role of NO as an Intercellular Messenger
15.8. Apoptosis (Programmed Cell Death)
Extrinsic Pathway of Apoptosis
Intrinsic Pathway of Apoptosis
16.1. Basic Properties of a Cancer Cell
16.2. Causes of Cancer
16.3. Genetics of Cancer
Tumor-Suppressor Genes and Oncogenes: Brakes and Accelerators
Cancer Genome
Gene-Expression Analysis
16.4. New Strategies for Combating Cancer
Immunotherapy
Inhibiting the Activity of Cancer-Promoting Proteins
Inhibiting the Formation of New Blood Vessels (Angiogenesis)
Experimental Pathways: The Discovery of Oncogenes
17.1. Overview of the Immune Response
Innate Immune Responses
Adaptive Immune Responses
17.2. Clonal Selection Theory as It Applies to B Cells
Vaccination
17.3. T Lymphocytes: Activation and Mechanism of Action
17.4. Selected Topics on the Cellular and Molecular Basis of Immunity
Modular Structure of Antibodies
DNA Rearrangements that Produce Genes Encoding B- and T-Cell Antigen Receptors
Membrane-Bound Antigen Receptor Complexes
Major Histocompatibility Complex
Distinguishing Self from Nonself
Lymphocytes Are Activated by Cell-Surface Signals
Signal Transduction Pathways in Lymphocyte Activation
Human Perspective: Autoimmune Diseases
Experimental Pathways: The Role of the Major Histocompatibility Complex in Antigen Presentation
18.1. Light Microscope
Resolution
Visibility
Preparation of Specimens for Bright-Field Light Microscopy
Phase-Contrast Microscopy
Fluorescence Microscopy (and Related Fluorescence-Based Techniques)
Video Microscopy and Image Processing
Laser Scanning Confocal Microscopy
Super-Resolution Fluorescence Microscopy
18.2. Transmission Electron Microscopy
Specimen Preparation for Electron Microscopy
18.3. Scanning Electron and Atomic Force Microscopy
Atomic Force Microscopy
18.4. Use of Radioisotopes
18.5. Cell Culture
18.6. Fractionation of a Cell's Contents by Differential Centrifugation
18.7. Isolation, Purification, and Fractionation of Proteins
Selective Precipitation
Liquid Column Chromatography
Polyacrylamide Gel Electrophoresis
Protein Measurement and Analysis
18.8. Determining the Structure of Proteins and Multisubunit Complexes
18.9. Fractionation of Nucleic Acids
Separation of DNAs by Gel Electrophoresis
Separation of Nucleic Acids by Ultracentrifugation
18.10. Nucleic Acid Hybridization
18.11. Chemical Synthesis of DNA
18.12. Recombinant DNA Technology
Restriction Endonucleases
Formation of Recombinant DNAs
DNA Cloning
18.13. Enzymatic Amplification of DNA by PCR
Applications of PCR
18.14. DNA Sequencing
18.15. DNA Libraries
Genomic Libraries
cDNA Libraries
18.16. DNA Transfer into Eukaryotic Cells and Mammalian Embryos
18.17. Determining Eukaryotic Gene Function by Gene Elimination or Silencing
In Vitro Mutagenesis
Knockout Mice
RNA Interference
18.18. Use of Antibodies.